- Cousin by Wilco prod. by Cate Le Bon
- Cruel Country by Wilco prod. by Tom Schick
- Cry All Day by Wilco prod. by Tom Schick
- Dark Neon by Wilco prod. by Jim Scott & Wilco
- Darkness Is Cheap by Wilco prod. by Tom Schick
- Dash 7 by Wilco prod. by Brian Paulson & Wilco
- Dawned on Me by Wilco prod. by Pat Sansone & Tom Schick
- Dawned on Me prod. by Tom Schick
- D. Boon by Uncle Tupelo prod. by Paul Q. Kolderie & Sean Slade
- Deeper Down by Wilco prod. by Jim Scott & Wilco
- Desert Bell by Tweedy
- Diamond Light, Pt. 1 by Tweedy
- Dig a Pony by Wilco prod. by Tom Schick (Unreleased)
- Discarded by Uncle Tupelo prod. by Paul Q. Kolderie & Sean Slade
- Don't Forget
- Don't Knock by Mavis Staples
- Don't Let Me Down by Wilco prod. by Tom Schick
- Don't You Honey Me by Wilco
- Doo-Wah by Kids These Days
- Down from Above by Tweedy