- Dreamer in My Dreams by Wilco prod. by Wilco
- Dungeons For Eyes by Richard Thompson
- Dynamite My Soul by Wilco prod. by Wilco
- Effigy by Uncle Tupelo prod. by Brian Paulson
- Either Way by Wilco prod. by Wilco
- EKG by Wilco prod. by Tom Schick
- Elegant Transaction by Loose Fur prod. by Loose Fur
- ELT by Wilco prod. by Wilco
- ELT (King Size Demo Version) by Wilco prod. by Wilco
- Empty Head
- End Credits (Ft. Glenn Kotche) prod. by Alex Steyermark
- Even I Can See prod. by Tom Schick
- Even Though by Joan Shelley
- Evergreen
- Everlasting Everything by Wilco prod. by Jim Scott & Wilco
- Ever The Dark by Rodney Crowell
- Every Little Thing – Alternate by Wilco prod. by Jay Bennett, John Stirratt & Ken Coomer
- Everyone Hides by Wilco prod. by Tom Schick
- Every Step by Mavis Staples